CDS
| Accession Number | TCMCG002C13582 |
| gbkey | CDS |
| Protein Id | XP_020095004.1 |
| Location | complement(join(4643057..4643098,4643191..4643305,4644883..4644971,4645064..4645301,4645841..4645905,4647127..4647210,4647303..4647377,4647454..4647540,4656593..4656806,4660914..4660969,4662564..4662620,4662736..4662817,4667506..4668125)) |
| Gene | LOC109714717 |
| GeneID | 109714717 |
| Organism | Ananas comosus |
Protein
| Length | 607aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA371634 |
| db_source | XM_020239415.1 |
| Definition | RNA-binding protein 39 isoform X1 [Ananas comosus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | linker between RRM2 and RRM3 domains in RBM39 protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K13091
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0016604 [VIEW IN EMBL-EBI] GO:0016607 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044451 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAGTTCGACGAGTACGAGTACCTAGAGAAGGCGGTGGAGAACTCTCAGTCTCCGGCAAACGGCGGCGGGTTGCCGGGGTCGAAGGAGAAGGAGCGTTCCGGCGATTCCAAGCGCCGCTCCTCCGCCGCCACCGTCGAGGCGGAGCGCGATGGGGAGCGGCGCTCGAAGCACCGGCGGTCGGAGGACCGCGACGGAGACGAGCGCCGCGGCTCGTCCCGCCACCGCTCGTCGCTGGAGCGCGGGGAGCGTGAGCGGGAGCGGGAGCGGCACAGGAGCAAGAGGGAGCACAAGGAAGCAGATCGCGACGAGAGGGAGAGGGAGAAGGAGAAAGATAAGGAGAGGTCGAGGGAGCGGGATCGCGAGAAGGAGCGAGAGCGCGACAGGGAGAAGGAGAAGGATAAGGATAAGGATAAGGATAAGGATAAGGATAGGGAGAAGGATAGGGATAGGGATAGGGAGAGGGAGAGGGAGAGGGACAAGGATAAGGAGAGGGAGCGGTCACGGAGGAGCAGGAGCAAGTCTGAGAAGCATAGGGAGGAGGAGCGTGACGGCGACCGGGCCCAGGAGAGGAGCAGGGAGAGGGACTACAGATTAAGGGAGTATGAACGCGATCACAGGCGTTACAGAGATAAGAAAGAAGAAGCTGCAGAACCGGAGGCTGATCCTGAAAGGGATCAGAGAACTGTTTTTGCTTATCAGCTCTCTTTGAAGGCAGATGAAAGAGATGTTTATGACTTCTTTTCGAGGGCTGGAAAGGTGCGGGATGTTCGCCTAATTATGGATCGTAATTCGAGACGTTCTAAAGGAGTTGGGTATATTGAGTTTTATGACGTTATGTCTGTTCCAATGGCGATTGCTCTCTCTGGACAGCTGCTTCTTGGGCAACCAGTAATGGTAAAGCCCTCAGAAGCAGAAAAGAATTTAGTCCAGTCAACTACTTCTGCAGGTGGAGCAGCTTCTGGTGGAGCAAGAAAGTTATATGTTGGGAATCTCCATTCGAACATTACTGAAGATCAACTTCGACAGGTGTTTGAACCATTTGGTCAAGTCGAGCTTGTTCAATTGCCTCTTGACCCATTGACTGGGCTTTGCAAAGGTTTTGGTTTCATTCAGTTTGCGCGCCTTGAAGATGCGAGAGCTGCGCAAAGTTTAAATGGACAACTTGACATTGCTGGCAGGATAATTAAGGTTTCAGCTGTAACGGACCAAGCTGGAGTGCAAGCTAGTGGAACAAATACTGGAGATTTGGATGATGATGAAGGTGGAGGCTTGGCACTAAACGCTAGCTCTAGGGCTCTGCTCATGCAGAAGTTGGACCGGAGCGGCACTACAACTAGCATGACTAGTGGGCTTGTTGCTCCTGCGGCCAATACTGCTGCGCTTCCTCTGCCTGCTGCATCAGTTCTTGGTGCTCCTCCACTGGCTAATCCATTTCTACCAACCACTGTGCCTCCTATTGGAGGAGTACCTGCTTCAGGTCTTCTTCCAGTTCCAAGCCTTAGCATGCCTTCTGTCGAGTCTGCTGTTCCTAGTGAATGCTTGTTGCTGAAGAATATGTTCGATCCAAGTGTGGAGACGGAACCTGATTTTGATTTAGATATTAAAGATGATGTTTCAGAGGAATGTTCCAAATTTGGCACAGTGAAGCACATTTTTGTGGACAAAAACAGTGCTGGCTTTGTTTATCTACGGTTTGATAGTGCATCCTCGGCCATGAATGCACAGCGGGCGCTCCATGGGAGGTGGTTTGCTGGAAAGATGATCACAGCAAGTTATCTGTCTCCACAATACTACGAGGCAAAGTTTCTGAGCGGAAGCTAA |
| Protein: MEFDEYEYLEKAVENSQSPANGGGLPGSKEKERSGDSKRRSSAATVEAERDGERRSKHRRSEDRDGDERRGSSRHRSSLERGERERERERHRSKREHKEADRDEREREKEKDKERSRERDREKERERDREKEKDKDKDKDKDKDREKDRDRDRERERERDKDKERERSRRSRSKSEKHREEERDGDRAQERSRERDYRLREYERDHRRYRDKKEEAAEPEADPERDQRTVFAYQLSLKADERDVYDFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTTSAGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFIQFARLEDARAAQSLNGQLDIAGRIIKVSAVTDQAGVQASGTNTGDLDDDEGGGLALNASSRALLMQKLDRSGTTTSMTSGLVAPAANTAALPLPAASVLGAPPLANPFLPTTVPPIGGVPASGLLPVPSLSMPSVESAVPSECLLLKNMFDPSVETEPDFDLDIKDDVSEECSKFGTVKHIFVDKNSAGFVYLRFDSASSAMNAQRALHGRWFAGKMITASYLSPQYYEAKFLSGS |